STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpC_1Nitrate transport protein NasD. (262 aa)    
Predicted Functional Partners:
nrtA
Nitrate transport protein NrtA.
 
 0.999
cmpB_1
Nitrate transport permease protein NrtB.
 
 0.998
narB_1
Nitrate reductase.
 
  
 0.982
narI_2
Respiratory nitrate reductase 2 gamma chain.
     
  0.900
narY
Respiratory nitrate reductase 2 beta chain.
     
  0.900
narZ_4
Respiratory nitrate reductase 2 alpha chain.
     
  0.900
narI_1
Respiratory nitrate reductase 1 gamma chain.
     
  0.900
narH_1
Respiratory nitrate reductase 1 beta chain.
     
  0.900
narG_1
Respiratory nitrate reductase 1 alpha chain.
     
  0.900
rubB
Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
   
 0.900
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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