STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mviM_2Putative oxidoreductase YceM. (307 aa)    
Predicted Functional Partners:
yceH_2
UPF0502 protein; Belongs to the UPF0502 family.
 
    0.978
rimJ
Ribosomal-protein-alanine acetyltransferase.
 
    0.929
yhhX
Putative oxidoreductase YhhX.
  
     0.712
entA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.
   
  
 0.682
entF
Enterobactin synthase component F.
      
 0.671
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
  
 0.640
ydgJ_4
Putative oxidoreductase YdgJ.
  
     0.632
iolB
5-deoxy-glucuronate isomerase.
  
  
 0.629
mviN
Membrane protein.
     
 0.599
hpd
Hemolysin VllY.
  
  
 0.536
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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