STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puuR_1HTH-type transcriptional regulator PuuR. (185 aa)    
Predicted Functional Partners:
puuD
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD.
 
  
 0.960
puuA_2
Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family.
 
  
 0.907
puuB_2
Gamma-glutamylputrescine oxidoreductase.
 
  
 0.863
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.734
AML35679.1
Putative HTH-type transcriptional regulator.
  
     0.653
sinR_1
Putative HTH-type transcriptional regulator YdcN.
  
     0.625
AML35995.1
4-aminobutyrate aminotransferase PuuE.
 
  
 0.616
glnA
Glutamine synthetase.
  
  
 0.558
puuB_3
Gamma-glutamylputrescine oxidoreductase.
 
  
 0.556
puuC_2
Aldehyde dehydrogenase PuuC; Belongs to the aldehyde dehydrogenase family.
 
  
 0.553
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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