STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML36107.1Minor capsid protein C. (443 aa)    
Predicted Functional Partners:
AML36110.1
Large terminase protein.
 
    0.989
AML36105.1
Major head protein.
    0.985
AML36108.1
Portal protein B.
    0.963
AML36106.1
Head decoration protein.
  
  
 0.956
AML36094.1
Hypothetical protein.
   
    0.820
AML36104.1
DNA-packaging protein FI.
  
    0.809
AML36109.1
Lambda prophage-derived head-to-tail joining protein W.
  
    0.784
AML36111.1
DNA-packaging protein NU1 like.
  
    0.614
fxsA
UPF0716 protein FxsA.
      
 0.594
AML36840.1
Hypothetical protein.
  
     0.515
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.