STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML36165.1Putative lipoprotein YmbA. (187 aa)    
Predicted Functional Partners:
yebS_3
Paraquat-inducible protein B.
   
 0.982
AML36167.1
Paraquat-inducible protein A.
  
 0.982
rlmL_2
Ribosomal RNA large subunit methyltransferase K/L; Belongs to the methyltransferase superfamily.
       0.776
AML36168.1
ABC transporter ATP-binding protein uup.
       0.750
AML37377.1
Translocation and assembly module TamB.
 
     0.611
yccS_1
Hypothetical protein.
  
     0.609
yebS_1
Inner membrane protein YebS.
  
 0.589
glrK
Sensor histidine kinase GlrK.
  
     0.564
ycbX
Hypothetical protein.
       0.523
lpoA
Penicillin-binding protein activator LpoA; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.
  
     0.501
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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