STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycaD_2Putative MFS-type transporter. (382 aa)    
Predicted Functional Partners:
zapC
Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.605
tsgA
Protein TsgA like.
  
     0.581
AML36687.1
Putative lipoprotein YajG.
  
     0.505
hemY
Protein HemY.
  
     0.492
yccS_1
Hypothetical protein.
  
    0.465
AML34024.1
Hypothetical protein.
  
     0.430
dmsC_2
Anaerobic dimethyl sulfoxide reductase chain C.
       0.414
dmsB_2
Anaerobic dimethyl sulfoxide reductase chain B.
       0.414
dmsA_2
Dimethyl sulfoxide reductase DmsA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.412
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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