STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDATP-binding/permease protein CydD. (588 aa)    
Predicted Functional Partners:
msbA_2
ATP-binding/permease protein CydC.
 
 
0.998
cydB_3
Cytochrome bd-I ubiquinol oxidase subunit 2.
 
  
 0.913
ybbL_2
Putative ABC transporter ATP-binding protein YbbL.
 
    
0.902
pstB
Phosphate import ATP-binding protein PstB; Belongs to the ABC transporter superfamily.
 
     
0.899
cydA_4
Cytochrome bd-I ubiquinol oxidase subunit 1.
  
 0.894
glnQ_3
Glutamine transport ATP-binding protein GlnQ.
 
    
0.883
proV_2
Glycine betaine/L-proline transport ATP-binding protein ProV.
 
     
0.881
artM_9
Glutamine transport ATP-binding protein GlnQ.
 
    
0.879
metN_3
Methionine import ATP-binding protein MetN 1; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
     
0.859
AML36002.1
Fe(3+) ions import ATP-binding protein FbpC.
 
     
0.806
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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