STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msbA_2ATP-binding/permease protein CydC. (573 aa)    
Predicted Functional Partners:
cydD
ATP-binding/permease protein CydD.
 
 
0.998
cydB_3
Cytochrome bd-I ubiquinol oxidase subunit 2.
 
  
 0.853
AML36002.1
Fe(3+) ions import ATP-binding protein FbpC.
 
     
0.821
cydA_4
Cytochrome bd-I ubiquinol oxidase subunit 1.
  
 0.783
potA_6
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
     
0.702
aat
Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.681
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     
0.647
cydB_1
Cytochrome bd-II ubiquinol oxidase subunit 2.
  
  
 0.637
AML35236.1
Cytochrome bd-II ubiquinol oxidase subunit 2.
  
  
 0.637
AML35394.1
Cytochrome bd-I ubiquinol oxidase subunit 2.
  
  
 0.637
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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