STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybjPPutative lipoprotein YbjP. (171 aa)    
Predicted Functional Partners:
nfnB
Oxygen-insensitive NAD(P)H nitroreductase.
      
 0.649
rpmI
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
     
 0.573
engB
Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
      
 0.547
artP
Arginine transport ATP-binding protein ArtP.
    
 0.544
artI_2
Putative ABC transporter arginine-binding protein 2; Belongs to the bacterial solute-binding protein 3 family.
 
    0.541
rof
Protein rof.
      
 0.495
AML36244.1
Long-chain fatty acid transport protein.
       0.485
artM_7
Arginine ABC transporter permease protein ArtM.
       0.467
artQ_2
Arginine ABC transporter permease protein ArtQ.
       0.457
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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