STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpA_3Putative HTH-type transcriptional regulator in aml 5'region. (357 aa)    
Predicted Functional Partners:
AML37889.1
Catabolite control protein A.
  
     0.775
AML35360.1
HTH-type transcriptional regulator GalR.
  
     0.774
degA
Maltose regulon regulatory protein MalI.
  
     0.774
fruR_1
Sucrose operon repressor.
  
     0.774
rbsR_1
HTH-type transcriptional regulator KdgR.
  
     0.774
galS
HTH-type transcriptional regulator GalS.
  
     0.773
galR_1
HTH-type transcriptional regulator GalR.
  
     0.773
rbsR_2
HTH-type transcriptional repressor PurR.
  
     0.772
gntR_1
HTH-type transcriptional regulator GntR.
  
     0.768
rbtR
Ribitol operon repressor; Repressor for the genes of the ribitol operon. Binds D- ribulose as an inducer.
  
     0.745
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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