Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AML38989.1 | ompA | EAG7_05259 | EAG7_02416 | Cytochrome c-type protein TorY. | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | 0.682 |
| AML38989.1 | ompX | EAG7_05259 | EAG7_02563 | Cytochrome c-type protein TorY. | Outer membrane protein X. | 0.644 |
| lepB | ompA | EAG7_05381 | EAG7_02416 | Signal peptidase I; Belongs to the peptidase S26 family. | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | 0.730 |
| lepB | ompX | EAG7_05381 | EAG7_02563 | Signal peptidase I; Belongs to the peptidase S26 family. | Outer membrane protein X. | 0.553 |
| lepB | pal | EAG7_05381 | EAG7_02645 | Signal peptidase I; Belongs to the peptidase S26 family. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.548 |
| mdfA | ompX | EAG7_02529 | EAG7_02563 | Multidrug transporter MdfA. | Outer membrane protein X. | 0.469 |
| ompA | AML38989.1 | EAG7_02416 | EAG7_05259 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Cytochrome c-type protein TorY. | 0.682 |
| ompA | lepB | EAG7_02416 | EAG7_05381 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.730 |
| ompA | ompC | EAG7_02416 | EAG7_00360 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane protein C; Belongs to the Gram-negative porin family. | 0.976 |
| ompA | ompF | EAG7_02416 | EAG7_02437 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane protein F. | 0.876 |
| ompA | ompR | EAG7_02416 | EAG7_04455 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Transcriptional regulatory protein OmpR. | 0.597 |
| ompA | ompW | EAG7_02416 | EAG7_01134 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane protein W. | 0.736 |
| ompA | ompX | EAG7_02416 | EAG7_02563 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane protein X. | 0.784 |
| ompA | pal | EAG7_02416 | EAG7_02645 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.900 |
| ompA | skp | EAG7_02416 | EAG7_03154 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Chaperone protein Skp; Belongs to the skp family. | 0.934 |
| ompC | ompA | EAG7_00360 | EAG7_02416 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | 0.976 |
| ompC | ompF | EAG7_00360 | EAG7_02437 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Outer membrane protein F. | 0.547 |
| ompC | ompR | EAG7_00360 | EAG7_04455 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Transcriptional regulatory protein OmpR. | 0.692 |
| ompC | ompW | EAG7_00360 | EAG7_01134 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Outer membrane protein W. | 0.458 |
| ompC | ompX | EAG7_00360 | EAG7_02563 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Outer membrane protein X. | 0.711 |
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