STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ampHD-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH. (386 aa)    
Predicted Functional Partners:
AML39133.1
Stationary phase-inducible protein CsiE.
  
     0.633
sgrR_2
HTH-type transcriptional regulator SgrR.
  
     0.617
msrB
Peptide methionine sulfoxide reductase MsrB.
      
 0.589
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.528
rstB_1
Sensor protein RstB.
  
    0.518
rutB_2
Putative isochorismatase family protein.
       0.506
AML36186.1
Putative L,D-transpeptidase YcbB.
  
     0.484
yhjJ
Protein YhjJ.
  
    0.464
ycfJ
Hypothetical protein.
  
     0.454
AML39147.1
Protein SseB.
  
     0.435
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.