STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhdYGeneral L-amino acid transport system permease protein AapM. (234 aa)    
Predicted Functional Partners:
artM_9
Glutamine transport ATP-binding protein GlnQ.
 
 0.997
glnP_2
Glutamate/aspartate transport system permease protein GltJ.
 
 
0.997
fliY_9
ABC transporter glutamine-binding protein GlnH; Belongs to the bacterial solute-binding protein 3 family.
 
 0.976
gltJ
Glutamate/aspartate transport system permease protein GltJ.
 
 
0.920
artM_8
Glutamate/aspartate transport ATP-binding protein GltL.
 
 
 0.876
artM_4
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.874
glnQ_3
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.870
tcyC_3
Glutamate transport ATP-binding protein GluA.
 
 
 0.869
artM_2
Putative amino-acid ABC transporter ATP-binding protein YecC.
 
 
 0.867
glnQ_2
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.865
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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