Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML36816.1Cyclic di-GMP phosphodiesterase YhjH. (234 aa)    
Predicted Functional Partners:
AML34805.1
Putative signaling protein.
 
 
 0.849
yfiN_1
Putative diguanylate cyclase YfiN.
  
  
 0.846
AML35498.1
Putative signaling protein.
 
  
 0.845
AML34527.1
Cellulose synthesis regulatory protein.
  
  
 0.842
AML36075.1
Motility protein A.
   
    0.841
AML33992.1
Hypothetical protein.
  
  
 0.827
csrD_2
RNase E specificity factor CsrD.
  
  
 0.825
AML37235.1
Diguanylate cyclase DosC.
  
  
 0.823
AML34822.1
Putative diguanylate cyclase YeaJ.
  
  
 0.819
pleD_2
Protein AdrA.
  
  
 0.814
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.