Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML36831.1Hypothetical protein. (415 aa)    
Predicted Functional Partners:
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
      0.884
AML36833.1
Succinoglycan biosynthesis transport protein ExoP.
     
 0.866
AML36832.1
Exopolysaccharide production protein ExoF.
       0.822
AML36834.1
Hypothetical protein.
       0.817
AML36835.1
Hypothetical protein.
       0.817
AML36839.1
Hypothetical protein.
       0.787
AML36836.1
Putative glycosyltransferase.
       0.785
glgA_6
Putative glycosyltransferase.
       0.781
glgA_7
Capsular polysaccharide biosynthesis glycosyltransferase CapM.
       0.781
AML36840.1
Hypothetical protein.
       0.753
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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