STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yacHHypothetical protein. (546 aa)    
Predicted Functional Partners:
AML36957.1
Hypothetical protein.
 
   
 0.953
AML37088.1
Chitinase A1.
 
  
 0.634
AML36510.1
Chitinase A1.
 
  
 0.630
ybhC_2
Putative acyl-CoA thioester hydrolase YbhC.
  
   
 0.601
ftsK
DNA translocase FtsK.
    
 
 0.597
AML37504.1
Hypothetical protein.
 
    0.588
AML36955.1
Hypothetical protein.
       0.572
AML37040.1
Hypothetical protein.
  
   
 0.559
AML35965.1
UPF0118 inner membrane protein YdiK.
 
     0.479
qseG
Quorum-sensing regulator protein G.
    
 
 0.473
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.