Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML36957.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
AML36051.1
Peptidoglycan hydrolase FlgJ.
  
 
 0.978
yacH
Hypothetical protein.
 
  
 0.960
AML36058.1
Flagellar basal-body rod protein FlgC.
  
 
 0.888
AML36019.1
Flagellar hook-basal body complex protein FliE.
 
 
 0.871
AML36055.1
Flagellar basal-body rod protein FlgF.
  
 
 0.864
AML36052.1
Flagellar P-ring protein 2.
  
 
 0.835
AML36053.1
Flagellar L-ring protein 2.
  
 
 0.835
AML36056.1
Flagellar hook protein FlgE.
  
 
 0.835
AML36059.1
Flagellar basal body rod protein FlgB.
  
 
 0.835
AML36020.1
Flagellar M-ring protein.
  
 
 0.832
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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