STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML36966.1Extracellular exo-alpha-(1->5)-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (316 aa)    
Predicted Functional Partners:
yicJ_4
Inner membrane symporter YicJ.
  
 0.904
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.788
xynB_2
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.746
AML38555.1
Lactose permease.
 
  
 0.619
yicI_2
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
 
     0.617
lacY_3
Sucrose transport protein.
 
  
 0.596
AML38554.1
Hypothetical protein.
 
     0.557
lacY_4
Lactose permease.
 
  
 0.549
yesR
Unsaturated rhamnogalacturonyl hydrolase YesR.
  
     0.527
AML33928.1
Unsaturated rhamnogalacturonyl hydrolase YesR.
  
     0.506
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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