STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML37063.1Putative isomerase YbhH. (351 aa)    
Predicted Functional Partners:
AML37060.1
Hypothetical protein.
  
  
 0.806
AML37066.1
Putative HTH-type transcriptional regulator YbhD.
 
    0.738
AML36433.1
Fumarate reductase flavoprotein subunit.
    0.713
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.701
AML37062.1
Inner membrane protein YbhI.
 
     0.693
guaA_1
GMP synthase glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP.
 
 
   0.637
hpd
Hemolysin VllY.
 
    0.634
AML36039.1
4-carboxy-4-hydroxy-2-oxoadipic acid aldolase.
 
   
 0.603
gltA_1
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.581
AML37064.1
Hypothetical protein.
       0.571
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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