Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML37083.1Chaperone protein FimC. (239 aa)    
Predicted Functional Partners:
AML37082.1
Putative outer membrane usher protein ElfC.
 
 
 0.972
AML37079.1
Putative fimbrial-like protein YcbV.
 
 
 0.960
AML37084.1
Type-1 fimbrial protein, A chain.
 
 
 0.940
AML36814.1
Outer membrane usher protein FimD.
 
 
 0.885
fimD_8
Outer membrane usher protein LpfC.
 
 
 0.885
fimD_2
Outer membrane usher protein FimD.
 
 
 0.885
AML38697.1
Outer membrane usher protein PmfC.
 
 
 0.884
AML38749.1
Putative outer membrane usher protein YehB.
 
 
 0.884
AML38698.1
Outer membrane usher protein PmfC.
 
 
 0.867
AML37512.1
Outer membrane usher protein LpfC.
 
 
 0.861
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.