Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML37088.1Chitinase A1. (704 aa)    
Predicted Functional Partners:
AML36890.1
Endochitinase 2.
 
 
 0.926
chiA1
Chitinase A1; Belongs to the glycosyl hydrolase 18 family.
 
 
0.909
AML36510.1
Chitinase A1.
 
 
0.906
AML36093.1
Host specificity protein J.
   
 
 0.883
AML37091.1
Hypothetical protein.
 
   
 0.812
AML37087.1
Hypothetical protein.
  
 
 0.751
AML35716.1
Hypothetical protein.
  
   
 0.743
AML37344.1
Beta-hexosaminidase.
 
  
 0.721
AML38562.1
Desosaminyl transferase EryCIII.
  
  
 0.681
yacH
Hypothetical protein.
 
  
 0.636
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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