STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML37093.1HTH-type transcriptional regulator LinR. (314 aa)    
Predicted Functional Partners:
nodD2_3
PCP degradation transcriptional activation protein; Belongs to the LysR transcriptional regulatory family.
  
     0.768
yidZ
HTH-type transcriptional regulator YidZ; Involved in anaerobic NO protection.
  
     0.764
pcpR
PCP degradation transcriptional activation protein.
  
     0.732
AML35716.1
Hypothetical protein.
  
     0.659
AML37088.1
Chitinase A1.
  
     0.589
AML36510.1
Chitinase A1.
  
     0.570
moaR
Monoamine regulon transcriptional regulator; Positive regulatory protein for the induction of arylsulfatase synthesis (maoA), tyramine oxidase (tynA), maoC, maoE/F operon, and atsB/A operon which are all regulated by monoamines, and included under the common term of monoamine regulon.
  
    0.538
steT
Putative amino acid permease YhdG.
  
     0.531
AML38562.1
Desosaminyl transferase EryCIII.
  
     0.513
AML37092.1
Hypothetical protein.
  
    0.506
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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