Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AML37093.1HTH-type transcriptional regulator LinR. (314 aa)    
Predicted Functional Partners:
nodD2_3
PCP degradation transcriptional activation protein; Belongs to the LysR transcriptional regulatory family.
  
     0.768
yidZ
HTH-type transcriptional regulator YidZ; Involved in anaerobic NO protection.
  
     0.764
pcpR
PCP degradation transcriptional activation protein.
  
     0.732
AML35716.1
Hypothetical protein.
  
     0.659
AML37088.1
Chitinase A1.
  
   
 0.617
AML36510.1
Chitinase A1.
  
   
 0.599
AML37092.1
Hypothetical protein.
  
  
 0.568
moaR
Monoamine regulon transcriptional regulator; Positive regulatory protein for the induction of arylsulfatase synthesis (maoA), tyramine oxidase (tynA), maoC, maoE/F operon, and atsB/A operon which are all regulated by monoamines, and included under the common term of monoamine regulon.
  
    0.539
steT
Putative amino acid permease YhdG.
  
     0.531
AML38562.1
Desosaminyl transferase EryCIII.
  
     0.513
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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