Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
arcAAerobic respiration control protein ArcA. (238 aa)    
Predicted Functional Partners:
arcB_1
Aerobic respiration control sensor protein ArcB.
 
 0.997
barA
Signal transduction histidine-protein kinase BarA.
 
 
 0.865
AML35265.1
Sensor protein CpxA.
 
 
 0.811
cpxA
Sensor protein CpxA.
 
 
 0.793
envZ_1
Osmolarity sensor protein EnvZ.
 
 
 0.787
nuoC_2
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
   0.760
phoR_3
Phosphate regulon sensor protein PhoR.
 
 
 0.731
basS_1
Sensor protein BasS.
 
 
 0.667
narL
Nitrate/nitrite response regulator protein NarL.
  
 
 0.647
AML36067.1
Chemotaxis protein CheY.
  
     0.623
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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