Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
creD_1Inner membrane protein CreD. (450 aa)    
Predicted Functional Partners:
creC
Sensor protein CreC.
 
   
 0.958
creB
Transcriptional regulatory protein CreB.
 
   
 0.750
AML37111.1
Protein CreA.
     
 0.659
AML37571.1
RNA-splicing ligase RtcB.
  
     0.583
ybhC_2
Putative acyl-CoA thioester hydrolase YbhC.
  
     0.559
AML33902.1
Putative lipoprotein YfhM; Protects the bacterial cell from host peptidases.
  
     0.537
AML37575.1
Transcriptional regulatory protein RtcR.
  
     0.524
ponA
Penicillin-binding protein 1C.
  
     0.521
AML36731.1
Putative HTH-type transcriptional regulator YobV.
  
     0.517
arnT_1
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
   
    0.470
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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