Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML37130.1Osmotically-inducible protein Y. (203 aa)    
Predicted Functional Partners:
AML37129.1
Hypothetical protein.
  
  
 0.952
yjbJ
UPF0337 protein YjbJ; Belongs to the UPF0337 (CsbD) family.
 
  
 0.946
ygaU
Hypothetical protein.
  
  
 0.873
AML36665.1
Putative lipoprotein YbaY.
   
  
 0.835
fbaB
Fructose-bisphosphate aldolase class 1.
   
    0.827
AML37128.1
Hypothetical protein.
      0.792
elaB_1
Hypothetical protein.
  
    0.705
AML34863.1
Osmotically-inducible lipoprotein E.
   
  
 0.703
osmC_2
Peroxiredoxin OsmC.
   
  
 0.690
yqjC
Protein YqjC.
   
    0.677
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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