Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yjjGPyrimidine 5'-nucleotidase YjjG. (225 aa)    
Predicted Functional Partners:
yfbR_2
5'-deoxynucleotidase.
     
 0.946
cpdB
2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 
 0.945
ushA_1
Silent protein UshA(0).
   
 
 0.931
tdk
Thymidine kinase.
 
  
 0.929
AML35371.1
5'-nucleotidase SurE.
     
 0.927
surE_1
5'/3'-nucleotidase SurE.
     
 0.927
udp
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (By similarity).
  
  
 0.925
udk
Uridine kinase.
 
 
 0.922
nagD
Ribonucleotide monophosphatase NagD.
   
 
 0.911
deoA_1
Thymidine phosphorylase.
     
 0.911
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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