STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybbH_4HTH-type transcriptional regulator HexR. (287 aa)    
Predicted Functional Partners:
glk_1
Glucokinase; Belongs to the bacterial glucokinase family.
   
 0.916
ybbH_1
Putative HTH-type transcriptional regulator.
  
     0.673
AML37161.1
D-threonine aldolase.
 
     0.613
ybbH_3
Putative HTH-type transcriptional regulator.
  
     0.585
AML37154.1
Puromycin N-acetyltransferase.
       0.551
ilvD_1
Phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.524
ptsG_5
PTS system N-acetylglucosamine-specific EIICBA component.
 
  
 0.480
eda
KHG/KDPG aldolase.
 
   
 0.447
dan
D-aminoacylase.
 
     0.431
AML37153.1
Ribosomal-protein-alanine acetyltransferase.
       0.415
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.