STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML37164.1Alpha-ketoglutaric semialdehyde dehydrogenase. (534 aa)    
Predicted Functional Partners:
AML37165.1
4-hydroxy-tetrahydrodipicolinate synthase.
 
 
 0.941
sucA
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.818
AML37167.1
4-hydroxyproline epimerase.
 
 
   0.811
icd
Isocitrate dehydrogenase [NADP].
   
 0.808
ldh
Putative oxidoreductase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.806
AML37163.1
Aspartate-proton symporter.
       0.741
AML37170.1
Hydrogen cyanide synthase subunit HcnB.
   
 0.663
gabT
4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.595
AML37166.1
HTH-type transcriptional regulator ChbR.
 
     0.560
porA
Putative pyruvate-flavodoxin oxidoreductase.
  
 
 0.514
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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