STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML37170.1Hydrogen cyanide synthase subunit HcnB. (420 aa)    
Predicted Functional Partners:
AML37168.1
Glycine oxidase.
 
 0.998
AML37169.1
Hydrogen cyanide synthase subunit HcnA.
 
  
  0.995
AML37167.1
4-hydroxyproline epimerase.
 
  
 0.991
AML37165.1
4-hydroxy-tetrahydrodipicolinate synthase.
  
  0.969
AML37164.1
Alpha-ketoglutaric semialdehyde dehydrogenase.
   
 0.663
hisE
Histidine biosynthesis bifunctional protein HisIE; In the N-terminal section; belongs to the PRA-CH family.
  
    0.640
AML34493.1
FAD dependent oxydoreductase.
 
 
 0.634
AML34638.1
Protein YobA.
  
 
   0.616
AML37166.1
HTH-type transcriptional regulator ChbR.
 
     0.593
ribE
Riboflavin synthase.
   
    0.580
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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