STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpcH4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Belongs to the HpcH/HpaI aldolase family. (265 aa)    
Predicted Functional Partners:
mhpD
2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
 
 0.998
hpcD
5-carboxymethyl-2-hydroxymuconate Delta-isomerase.
 
  
 0.967
hpcB
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.956
gabD_2
Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; Belongs to the aldehyde dehydrogenase family.
  
 
 0.942
gabD_1
Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; Belongs to the aldehyde dehydrogenase family.
  
 
  0.903
sad_2
Succinate-semialdehyde dehydrogenase [NADP(+)]; Belongs to the aldehyde dehydrogenase family.
  
 
  0.903
btr
Putative HTH-type transcriptional regulator YobQ.
 
  
 0.829
hpcE_1
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase.
  
  
 0.783
ttuB_4
Putative tartrate transporter.
  
  
 0.763
hpaB
4-hydroxyphenylacetate 3-monooxygenase oxygenase component.
 
  
 0.732
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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