Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
btrPutative HTH-type transcriptional regulator YobQ. (296 aa)    
Predicted Functional Partners:
hpcB
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.939
mhpD
2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
 
    0.900
hpcD
5-carboxymethyl-2-hydroxymuconate Delta-isomerase.
 
  
 0.894
hpcH
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
    0.864
ttuB_4
Putative tartrate transporter.
  
  
 0.811
badR
Homoprotocatechuate degradative operon repressor.
 
  
 0.747
hpcE_1
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase.
 
  
 0.706
hpcE_2
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase.
 
  
 0.703
AML34899.1
Putative HTH-type transcriptional regulator YdeC.
 
   0.701
melR
Melibiose operon regulatory protein.
  
   0.649
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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