STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyA_3Transcriptional regulator SlyA. (154 aa)    
Predicted Functional Partners:
yibH_6
Inner membrane protein YibH.
 
  
 0.909
AML37203.1
Hypothetical protein.
       0.802
slyA_2
Transcriptional regulator SlyA.
  
     0.759
AML38766.1
Putative HTH-type transcriptional regulator YdfF.
 
   
 0.731
lamB_1
Maltoporin.
  
     0.614
AML37885.1
Maltoporin.
  
     0.613
yggG_2
TPR repeat-containing protein YfgC; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state; Belongs to the peptidase M48B family.
      
 0.550
AML37206.1
Hypothetical protein.
       0.478
menB
1,4-Dihydroxy-2-naphthoyl-CoA synthase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  
 0.472
phrB
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
  
  
 0.472
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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