Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AML37225.1Carbon dioxide concentrating mechanism protein CcmL. (85 aa)    
Predicted Functional Partners:
AML37223.1
Propanediol utilization protein PduA.
   
 
 0.832
AML37222.1
Propanediol utilization protein PduA.
   
 
 0.826
AML37221.1
Propanediol utilization protein PduA.
   
 
 0.815
AML37229.1
Hypothetical protein.
   
 
 0.797
AML37226.1
NADPH-dependent butanol dehydrogenase.
       0.733
AML37224.1
Aldehyde-alcohol dehydrogenase.
     
 0.704
AML37227.1
Formate acetyltransferase 2.
     
 0.666
AML37230.1
Phosphate propanoyltransferase.
     
 0.582
AML37228.1
Pyruvate formate-lyase 2-activating enzyme.
     
 0.557
AML37231.1
Hypothetical protein.
       0.436
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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