Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yhhJInner membrane transport permease YhhJ. (374 aa)    
Predicted Functional Partners:
ybhF_2
Putative ABC transporter ATP-binding protein YbhF.
  
 0.973
macA_4
Hypothetical protein.
 
  
 0.973
ybhF_3
Putative ABC transporter ATP-binding protein YhiH.
 
  
0.946
macA_3
UPF0194 membrane protein.
 
  
 0.740
drrA
Putative ABC transporter ATP-binding protein YadG.
 
  
 0.604
AML37235.1
Diguanylate cyclase DosC.
       0.526
ycaO
Ribosomal protein S12 methylthiotransferase accessory factor YcaO.
  
  
 0.517
AML35098.1
Putative 24.3 kDa protein.
   
  
 0.485
ydjA
Putative NAD(P)H nitroreductase YdjA.
  
    0.471
rutE_1
Putative malonic semialdehyde reductase RutE.
  
    0.471
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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