STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cusS_3Sensor kinase CusS; Member of a two-component regulatory system. (480 aa)    
Predicted Functional Partners:
cusR_3
Transcriptional regulatory protein CusR.
 0.998
cusF_3
Cation efflux system protein CusF.
 
   
 0.850
ompR
Transcriptional regulatory protein OmpR.
 
 0.836
cusB_3
Cation efflux system protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.827
phoP_3
Putative transcriptional regulatory protein YclJ.
 
 0.815
basR_3
Transcriptional regulatory protein BasR.
 
 0.804
yycF
Transcriptional regulatory protein CpxR.
 
 0.794
basR_1
Transcriptional regulatory protein QseB.
 
 0.776
AML34089.1
Transcriptional regulatory protein tctD.
 
 0.775
ompR_2
Transcriptional regulatory protein OmpR.
 
 0.771
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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