STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbJUPF0337 protein YjbJ; Belongs to the UPF0337 (CsbD) family. (70 aa)    
Predicted Functional Partners:
AML37129.1
Hypothetical protein.
 
  
 0.898
AML37130.1
Osmotically-inducible protein Y.
 
  
 0.888
osmY_2
Osmotically-inducible protein Y.
 
  
 0.834
AML36576.1
Hypothetical protein.
  
    0.703
ydgH
Protein YdgH.
      
 0.674
osmY_1
Hypothetical protein.
 
  
 0.656
mepA_2
DNA-damage-inducible protein F.
      0.636
ygdR_2
Membrane protein.
   
    0.620
ygdR_3
Putative lipoprotein YgdI.
   
    0.620
ygdR_1
Putative lipoprotein YgdR.
   
    0.620
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.