STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdhR_2Putative HTH-type transcriptional regulator YieP. (233 aa)    
Predicted Functional Partners:
hsrA_5
Putative transport protein HsrA.
       0.752
AML37996.1
Putative L-lactate dehydrogenase operon regulatory protein.
  
     0.743
AML38429.1
Exu regulon transcriptional regulator.
  
     0.719
ydfH
Putative HTH-type transcriptional regulator YdfH.
  
  
 0.560
nadR_3
Trifunctional NAD biosynthesis/regulator protein NadR.
   
  
 0.514
mcbR
Putative HTH-type transcriptional regulator YdhC.
  
  
 0.487
csiR
HTH-type transcriptional repressor CsiR.
  
  
 0.485
fadR_1
Fatty acid metabolism regulator protein; Multifunctional regulator of fatty acid metabolism.
  
     0.416
AML37157.1
2-dehydro-3-deoxygalactonokinase.
  
 0.408
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.