STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML38066.1Putative HTH-type transcriptional regulator YhjB. (202 aa)    
Predicted Functional Partners:
barA
Signal transduction histidine-protein kinase BarA.
 
 
 0.949
uhpA_1
Transcriptional regulatory protein UhpA.
  
   
 0.787
arcB_1
Aerobic respiration control sensor protein ArcB.
  
 
 0.785
rcsB
Capsular synthesis regulator component B; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.
  
   
 0.747
uvrY
Response regulator UvrY.
  
   
 0.746
narX
Nitrate/nitrite sensor protein NarX.
 
 
 0.706
moaR
Monoamine regulon transcriptional regulator; Positive regulatory protein for the induction of arylsulfatase synthesis (maoA), tyramine oxidase (tynA), maoC, maoE/F operon, and atsB/A operon which are all regulated by monoamines, and included under the common term of monoamine regulon.
  
     0.538
AML35372.1
Transcriptional regulatory protein FixJ.
  
   
 0.486
sdiA
Regulatory protein SdiA.
 
 
 0.472
AML38065.1
Hypothetical protein.
       0.469
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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