Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AML38066.1Putative HTH-type transcriptional regulator YhjB. (202 aa)    
Predicted Functional Partners:
barA
Signal transduction histidine-protein kinase BarA.
 
 
 0.962
arcB_1
Aerobic respiration control sensor protein ArcB.
  
 
 0.853
uhpA_1
Transcriptional regulatory protein UhpA.
  
   
 0.788
rcsB
Capsular synthesis regulator component B; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.
  
   
 0.748
uvrY
Response regulator UvrY.
  
   
 0.747
narX
Nitrate/nitrite sensor protein NarX.
 
 
 0.718
moaR
Monoamine regulon transcriptional regulator; Positive regulatory protein for the induction of arylsulfatase synthesis (maoA), tyramine oxidase (tynA), maoC, maoE/F operon, and atsB/A operon which are all regulated by monoamines, and included under the common term of monoamine regulon.
  
     0.538
AML35372.1
Transcriptional regulatory protein FixJ.
  
   
 0.482
AML38065.1
Hypothetical protein.
       0.469
rcsD_1
Sensor-like histidine kinase RcsD.
   
 
 0.427
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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