STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggtGamma-glutamyltranspeptidase. (581 aa)    
Predicted Functional Partners:
ybdK_1
Carboxylate-amine ligase.
 
  
 0.928
pepA_2
Putative cytosol aminopeptidase; Belongs to the peptidase M17 family.
     
 0.918
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.916
bsaA_1
Vitamin B12 transport periplasmic protein BtuE; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.
     
 0.915
pepD
Cytosol non-specific dipeptidase.
     
 0.914
gor_3
Glutathione reductase.
     
 0.914
pepB
Peptidase B; Probably plays an important role in intracellular peptide degradation.
     
 0.912
pepN
Aminopeptidase N.
     
 0.910
kipI
Hypothetical protein.
   
 
  0.907
gshA
Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
    
  0.906
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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