STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML38179.1Exu regulon transcriptional regulator. (252 aa)    
Predicted Functional Partners:
greB_1
Transcription elongation factor GreB.
   
   0.593
AML38183.1
Hypothetical protein.
 
     0.571
AML38182.1
Mitochondrial enolase superfamily member 1.
 
     0.559
AML38181.1
Ureidoglycolate lyase.
 
     0.545
AML38185.1
L-fucose mutarotase.
 
     0.545
AML38180.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
 
    0.544
nadR_3
Trifunctional NAD biosynthesis/regulator protein NadR.
   
  
 0.514
ydfH
Putative HTH-type transcriptional regulator YdfH.
  
  
 0.484
gmuR
HTH-type transcriptional regulator GmuR.
  
    0.477
hutC
Histidine utilization repressor; Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer.
  
    0.453
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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