Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AML38179.1Exu regulon transcriptional regulator. (252 aa)    
Predicted Functional Partners:
greB_1
Transcription elongation factor GreB.
   
   0.593
AML38183.1
Hypothetical protein.
 
     0.571
AML38182.1
Mitochondrial enolase superfamily member 1.
 
     0.557
AML38180.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
 
    0.546
AML38181.1
Ureidoglycolate lyase.
 
     0.542
AML38185.1
L-fucose mutarotase.
 
     0.541
nadR_3
Trifunctional NAD biosynthesis/regulator protein NadR.
   
  
 0.539
gmuR
HTH-type transcriptional regulator GmuR.
  
    0.495
ydfH
Putative HTH-type transcriptional regulator YdfH.
  
  
 0.486
hutC
Histidine utilization repressor; Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer.
  
    0.472
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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