STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zntRHTH-type transcriptional regulator ZntR. (141 aa)    
Predicted Functional Partners:
AML38270.1
Hypothetical protein.
  
  
 0.928
AML35563.1
Putative HTH-type transcriptional regulator.
  
 
 
 0.786
arfA
Alternative ribosome-rescue factor A.
     
 0.621
rpoA_2
DNA-directed RNA polymerase subunit alpha.
   
 
 0.617
znuA
High-affinity zinc uptake system protein ZnuA.
      
 0.607
mntR
Transcriptional regulator MntR.
      
 0.596
zntB_2
Zinc transport protein ZntB; Mediates efflux of zinc ions; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
   
  
 0.553
fecA_3
Putative TonB-dependent receptor YncD.
      
 0.550
znuB
High-affinity zinc uptake system membrane protein ZnuB.
      
 0.547
zntA_1
Lead, cadmium, zinc and mercury-transporting ATPase.
 
  
 0.534
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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