STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrB_1Multidrug export protein AcrF. (1036 aa)    
Predicted Functional Partners:
acrA_1
Multidrug export protein AcrE; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.965
oprM_1
Outer membrane protein OprM.
 
 0.925
cusC_3
Cation efflux system protein CusC.
 
 0.910
acrA_2
Multidrug efflux pump subunit AcrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.897
oprM_2
Outer membrane protein OprM.
 
 0.889
mexA
Multidrug resistance protein MexA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.872
bepF_1
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.837
ttgA
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.758
macA_1
Macrolide export protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.642
yajC
UPF0092 membrane protein YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.580
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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