STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML38429.1Exu regulon transcriptional regulator. (258 aa)    
Predicted Functional Partners:
exuT_3
Hexuronate transporter.
 
   
 0.789
AML38564.1
Transcriptional regulator NanR.
  
     0.751
lutR_1
Galactonate operon transcriptional repressor.
  
     0.739
pdhR_2
Putative HTH-type transcriptional regulator YieP.
  
     0.719
yidP_1
Putative HTH-type transcriptional regulator YidP.
  
    0.589
nadR_3
Trifunctional NAD biosynthesis/regulator protein NadR.
   
  
 0.514
AML37885.1
Maltoporin.
  
     0.485
ydfH
Putative HTH-type transcriptional regulator YdfH.
  
  
 0.477
lamB_1
Maltoporin.
  
     0.470
yqjA
Inner membrane protein YqjA.
     
 0.468
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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