Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
garD_2Altronate dehydratase. (495 aa)    
Predicted Functional Partners:
uxaC
Uronate isomerase.
  
 0.991
uxaB
Altronate oxidoreductase; Belongs to the mannitol dehydrogenase family. UxaB subfamily.
 
 0.984
AML35382.1
Mannonate dehydratase.
 
 
 0.960
uxuA_2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.952
kduD_1
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
  
  
 0.922
AML35476.1
Starvation-sensing protein RspA.
    
 0.908
ydjH_2
2-dehydro-3-deoxygluconokinase.
    
 0.835
ydjH_1
2-dehydro-3-deoxygluconokinase.
    
 0.813
AML35886.1
Ribose-5-phosphate isomerase B.
     
 0.804
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.801
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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