STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lsrC_1Autoinducer 2 import system permease protein LsrC; Belongs to the binding-protein-dependent transport system permease family. (344 aa)    
Predicted Functional Partners:
lsrA_1
Autoinducer 2 import ATP-binding protein LsrA.
 0.997
lsrB_1
Autoinducer 2-binding protein LsrB.
 0.996
lsrD_1
Autoinducer 2 import system permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.973
rbsB_6
D-ribose-binding periplasmic protein.
 
 0.936
rbsB_5
D-ribose-binding periplasmic protein.
 
 0.894
rbsA1_1
Ribose import ATP-binding protein RbsA.
 
 0.892
xylG
Xylose import ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.887
mglA_3
Ribose import ATP-binding protein RbsA.
 
 0.885
araG_2
Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.881
AML36524.1
D-ribose-binding periplasmic protein.
 
 0.880
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.