STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqjHNADPH-dependent ferric-chelate reductase. (257 aa)    
Predicted Functional Partners:
entB
Isochorismatase.
 
  
 0.907
yqjI
Hypothetical protein.
   
 0.867
dhbE
Enterobactin synthase component E.
 
  
 0.853
entF
Enterobactin synthase component F.
 
  
 0.760
ybaN
Inner membrane protein YbaN.
  
  
 0.703
ynfD
Hypothetical protein.
      
 0.671
fepA_10
Ferrienterobactin receptor.
 
  
 0.641
AML38558.1
Ferrienterobactin receptor.
 
  
 0.611
AML35100.1
Putative microcin-H47 secretion/processing ATP-binding protein MchF.
   
   0.601
AML36149.1
Exotoxin translocation ATP-binding protein PaxB.
   
   0.601
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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