STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acoR_1Glycerol metabolism operon regulatory protein. (643 aa)    
Predicted Functional Partners:
dhaL
PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL.
 
 
 
 0.891
AML38340.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.795
dhaK_3
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
  
 
 
 0.654
dhaD
Glycerol dehydrogenase.
  
  
 0.613
dhaK_1
Dihydroxyacetone kinase.
    
 
 0.604
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM; Belongs to the PEP-utilizing enzyme family.
 
   
 0.578
AML37211.1
Transcriptional regulatory protein LevR.
  
     0.534
AML35628.1
Hypothetical protein.
 
     0.400
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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