STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML38540.1Aldehyde dehydrogenase PuuC. (502 aa)    
Predicted Functional Partners:
puuB_2
Gamma-glutamylputrescine oxidoreductase.
  
 
 0.925
puuB_3
Gamma-glutamylputrescine oxidoreductase.
  
 
  0.916
puuD
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD.
  
 
  0.907
puuC_2
Aldehyde dehydrogenase PuuC; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.904
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
      0.850
AML38539.1
Gamma aminobutyrate transaminase 3, chloroplastic.
   
 0.812
acs_1
Acetyl-coenzyme A synthetase.
   
 0.646
AML34427.1
long-chain-fatty-acid-CoA ligase.
   
 
 0.615
fadD_2
Long-chain-fatty-acid--CoA ligase.
   
 
 0.615
AML38008.1
Putative alcohol dehydrogenase.
 
 0.573
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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