STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML38562.1Desosaminyl transferase EryCIII. (371 aa)    
Predicted Functional Partners:
AML38561.1
Multidrug resistance protein 3.
 
  
 0.917
AML38560.1
Enterochelin esterase.
 
  
 0.871
AML38559.1
Ferri-bacillibactin esterase BesA.
 
  
 0.857
AML35716.1
Hypothetical protein.
  
     0.726
AML37088.1
Chitinase A1.
  
  
 0.661
AML36510.1
Chitinase A1.
  
  
 0.642
AML36890.1
Endochitinase 2.
  
  
 0.634
entF
Enterobactin synthase component F.
 
   
 0.612
entB
Isochorismatase.
  
  
 0.574
AML38563.1
Hypothetical protein.
       0.559
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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