STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML38607.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
AML38608.1
Protein TIC 55, chloroplastic.
  
    0.803
AML38606.1
Naphthalene 1,2-dioxygenase system ferredoxin subunit.
       0.802
AML38609.1
Pyridoxal 4-dehydrogenase.
       0.785
AML38610.1
Pca regulon regulatory protein.
       0.746
AML38611.1
Metapyrocatechase 2.
  
    0.634
AML38614.1
Hypothetical protein.
  
    0.606
AML38612.1
Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component.
       0.575
AML38617.1
Putative L-aspartate dehydrogenase.
       0.513
AML38613.1
Putative sulfoacetate transporter SauU.
       0.474
AML38615.1
Bifunctional epoxide hydrolase 2.
       0.457
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.